PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S00534.100
Common NameJCGZ_07721, LOC105638199
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family ERF
Protein Properties Length: 199aa    MW: 21707.1 Da    PI: 4.0604
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S00534.100genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.44.7e-152441055
             AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  Jcr4S00534.100  2 RNWGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 44
                    57**********843...6***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103220.112152IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-26153IPR001471AP2/ERF domain
SMARTSM003809.8E-29158IPR001471AP2/ERF domain
CDDcd000181.43E-27154No hitNo description
SuperFamilySSF541711.05E-17253IPR016177DNA-binding domain
PfamPF008471.6E-9244IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MRNWGKWVSE IREPRKKSRI WLGTFPTPEM AARAHDVAAL SIKGNSAILN FPELANSLPR  60
PASLAPRDVQ AAAAKAAQMD QFDQKAFDSA TTTTTSSSSP SMSSASASSL SSLVSAMDLS  120
TGSEEELSEI VELPSLGTSY EWTELSSDFV FVDSVDGWVY PPPWVQSLED SYGDGCLFDE  180
MTVTNTISNS FEQGLLWEY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012077358.11e-144PREDICTED: dehydration-responsive element-binding protein 3-like
SwissprotQ9LYD34e-69DREB3_ARATH; Dehydration-responsive element-binding protein 3
TrEMBLA0A067KPE21e-144A0A067KPE2_JATCU; Uncharacterized protein
STRINGPOPTR_0018s00270.11e-71(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19234263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.18e-55ERF family protein
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]